Sensitive and modular amplicon sequencing of Plasmodium falciparum diversity and resistance for research and public health

Abstract

Please read abstract in the article.

Description

DATA AVAILABILITY: All data are available in the Sequencing Read Archive, accession code PRJNA1180199. Code is available in GitHub (https://github.com/EPPIcenter/mad4hatter and https://github.com/andres-ad/madh_utilities).

Keywords

Malaria, Plasmodium falciparum, Targeted amplicon sequencing, Microhaplotype, Antimalarial resistance, hrp2 deletion, Csp, Identity-by-descent (IBD), Complexity of infection, Whole-genome sequencing (WGS)

Sustainable Development Goals

SDG-03: Good health and well-being

Citation

Aranda-Díaz, A., Neubauer Vickers, E., Murie, K. et al. Sensitive and modular amplicon sequencing of Plasmodium falciparum diversity and resistance for research and public health. Scientific Reports 15, 10737 (2025). https://doi.org/10.1038/s41598-025-94716-5.